Proteins Publications Ordered by Year
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Numbers match publication list
R-review article or chapter
C-published required conference proceedings paper
Higlighted titles link to abstracts
10. "Circular Dichroism and Magnetic Circular Dichroism of Iron-Sulfur Proteins," P. J. Stephens, A. J. Thomson, T. A. Keiderling, J. B. R. Dunn, J. Rawlings, K. K. Rao and D. O. Hall, Biochemistry, 17, 4770-78 (1978).
11. "Cluster Characterization in Iron-Sulfur Proteins by Magnetic Circular Dichroism," P. J. Stephens, A. J. Thomson, T. A. Keiderling, J. Rawlings, K. K. Rao and D. O. Hall, Proceedings of the National Academy of Science, 75, 5273-75 (1978).
RC60. "Vibrational Circular Dichroism of Biopolymers" T. A. Keiderling, S. C. Yasui, A. C. Sen, U. Narayanan, A. Annamalai, P. Malon, R. Kobrinskaya, L. Yang, in "F.E.C.S. Second International Conference on Circular Dichroism, Conference Proceedings," ed. M. Kajtar, L. Eötvös Univ., Budapest, 1987, p. 155-161.
C65. "Vibrational Circular Dichroism of Polypeptides and Proteins," S. C. Yasui, T. A. Keiderling, Mikrochimica Acta, II, 325-327, (1988).
C73. "Biopolymer Conformational Studies with Vibrational Circular Dichroism" T. A. Keiderling, S. C. Yasui, P. Pancoska, R. K. Dukor, L. Yang, SPIE Proceeding 1057, ("Biomolecular Spectroscopy", ed. H. H. Mantsch, R. R. Birge) 7-14 (1989).
75. "Enhanced Sensitivity to Conformation in Various Proteins. Vibrational Circular Dichroism Results" P. Pancoska, S. C. Yasui, T. A. Keiderling, Biochemistry 28, 5917-5923 (1989).
C78. "Vibrational Circular Dichroism of Proteins" P. Pancoska, S. C. Yasui, T. A. Keiderling SPIE Proceedings 1145 ("7th International Conference on FTS,"ed. D. G. Cameron) 154-155 (1989).
81. "Conformational Transitions of Phosvitin with pH Variation. Vibrational Circular Dichroism Study" S. C. Yasui, P. Pancoska, R. K. Dukor, T. A. Keiderling, V. Renugopalakrishnan, M. J. Glimcher, R. C. Clark, Journal of Biological Chemistry, 265 3780-3 788 (1990).
87. "Statistical Analyses of the Vibrational Circular Dichroism of Selected Proteins and Relationship to Secondary Structures." P. Pancoska, S. C. Yasui, T. A. Keiderling, Biochemistry 30, 5089-5103 (1991).
88. "Systematic Comparison of Statistical Analyses of Electronic and Vibrational Circular Dichroism for Secondary Structure Prediction of Selected Proteins." P. Pancoska and T. A. Keiderling, Biochemistry 30 6885-6895 (1991).
C91. "Conformational Studies of Proteins Using Vibrational Circular Dichroism" T. A. Keiderling, P. Pancoska, S. C. Yasui, M. Urbanova, R. K. Dukor in "Proteins: Structure, Dynamics and Design", ed. V. Renugopalakrishnan, P. R. Carey, I. C. P. Smith, S. G. Huang, A. C. Storer, ESCOMP, Leiden (1991). pp. 165-170.
RC92. "Protein Conformational Studies with Vibrational Circular Dichroism" P. Pancoska, T. A. Keiderling, in "Spectroscopy of Biological Molecules," ed. R. E. Hester and R. B. Girling, Special Publication 94 Royal Society of Chemistry, Cambridge, ( 1991) p. 121-124.
C93. "Back Propagation Neural Network Analysis of Circular Dichroism Spectra of Globular Proteins" M. Blazek, P. Pancoska, T. A. Keiderling, Neurocomputing 3 247-257 (1991).
C94. "Conformational study of a-lactalbumin using vibrational circular dichroism. Evidence for a difference in crystal and solution structures" M. Urbanova, R. K. Dukor, P. Pancoska, T. A. Keiderling in "Spectroscopy of Biological Molecules" ed. R. E. H ester, R. B. Girling, Special Publication 94 Royal Society of Chemistry, Cambridge (1991) p. 133-34.
96. "Comparison of alpha-Lactalbumin and Lysozyme using Vibrational Circular Dichroism. Evidence for a Difference in Crystal and Solution Structures." M. Urbanova, R. K. Dukor, P. Pancoska, V. P. Gupta, T. A. Keiderling Biochemistry 30, 10479-10485 (19 91).
100. "Vibrational CD of the Amide II band in Some Model Polypeptides and Proteins" V. P. Gupta, T. A. Keiderling, Biopolymers 32 239-248 (1992).
107. "Relationships between Secondary Structure fractions for globular proteins. Neural network analyses of crystallographic data sets." P. Pancoska, M. Blazek, T. A. Keiderling, Biochemistry 31 10250-10257 (1992).
R99. "Vibrational Circular Dichroism of Proteins Polysaccharides and Nucleic Acids" T. A. Keiderling, Chapter 8 in "Physical Chemistry of Food Processes, Vol. 2 Advanced Techniques, Structures and Applications" ed. I. Baianu, H. Pessen, T. Kumosinski, Va n Norstrand Reinhold, New York (1993) pp 307-337.
R112. "Structural Studies of Biological Macromolecules using Vibrational Circular Dichroism" T. A. Keiderling, P. Pancoska, Chapter 6 in Advances in Spectroscopy Vol. 21, "Biomolecular Spectroscopy Part B" ed. R. E. Hester, R. J. H. Clarke, John W iley Chichester (1993) pp 267-315.
113. "Frequency Analysis of Infrared Absorption and Vibrational Circular Dichroism of Proteins in D2O Solution." P. Pancoska, L. Wang, T. A. Keiderling, Protein Science, 2 411-419 (1993).
115. "Vibrational Circular Dichroism of Proteins in H2O Solution" V. Baumruk T. A. Keiderling Journal American Chemical Society 115 6939-6942 (1993).
121. "Spectroscopic study of the temperature dependent conformation of glucoamylase" M. Urbanova, P. Pancoska T. A. Keiderling Biochemica et Biophysica Acta 1203 290-294 (1993).
122. "FTIR Studies of the Secondary Structure of Spectrin under Different Ionic Strengths" C. C. LaBrake, L. Wang, T. A. Keiderling, L. W-M Fung Biochemistry 32 10296-10302 (1993).
R125. "Vibrational Circular Dichroism Spectroscopy of Peptides and Proteins" T. A. Keiderling, in "Circular Dichroism Interpretations and Applications," K. Nakanishi, N. Berova, R. Woody, Eds., VCH Publishers, New York, (1994) pp 497-521.
C131. "Protein Secondary Structure Determination using Vibrational Circular Dichroism" T. A. Keiderling, P. Pancoska, V. Baumruk, M. Urbanova, V. P. Gupta, R. K. Dukor, D. Huo, Ch. 16 in "Molecular Modelling" (ed. T. F. Kumosinski, M. N. Leibman) ACS Symposium Series 576, American Chemical Society, Washington, DC, pp 61-70 (1994).
C134. "Quantitative Analysis of Vibrational Circular Dichroism of Proteins. Problems and Perspectives" P. Pancoska, E. Bitto, V. Janota, T. A. Keiderling, Faraday Discussions 99 287-310 (1994).
C135. "Empirical Studies of Protein secondary Structure with Vibrational Circular Dichroism and Related Techniques. a-Lactalbumin and Lysozyme Examples." T. A. Keiderling, B. Wang, M. Urbanova, P. Pancoska, and R. K. Dukor Faraday Discussions 99 2 63-285 (1994).
141. "Comparison and Limits of Accuracy for Statistical Analyses of Protein Vibrational and Electronic Circular Dichroism Spectra in Terms of Correlations to and Predictions of Protein Secondary Structure," P. Pancoska, E. Bitto, V. Janota, M. Urbanova, V . P. Gupta, T. A. Keiderling, Protein Science 4, 1384-1401 (1995).
C143."Fundamental limitations on predictions of protein secondary structure using optical spectroscopy," Petr Pancoska, Eduard Bitto, Vit Janota and Timothy A. Keiderling in, Spectrosopy of Biological Molecules, Ed. J. C. Merlin, Kluwer Acad. Pub., Dordre cht, 1995, p. 85-86
R98. "Protein Structural Studies Using Vibrational Circular Dichroism Spectroscopy" T. A. Keiderling in "Spectroscopic Methods for Determining Protein Structure in Solution". ed. H. Havel, VCH Publishers, New York, (1996).
C118. "Vibrational Circular Dichroism of Proteins in H2O Solution" V. Baumruk, T. A. Keiderling "Fifth International Conference on The Spectroscopy of Biological Molecules" Th. Theophanides, J. Anastassopoulou, N. Fotopoulos (Eds), Kluwen Academic Publ., Dortrecht, 1993, 117-118.
R139. "Vibrational Circular Dichroism Applications to Conformational Analysis of Biomolecules" T. A. Keiderling in "Circular Dichroism and the Conformational Analysis of Biomolecules" ed G. D. Fasman, Plenum, New York (1996) p. 555-598
151. "Intercovertability of electronic and vibrational circular dichroism of proteins. A test of principle using neural network mapping" Petr Pancoska, Vit Janota, T. A. Keiderling, Applied Spectroscopy, 50, 658-668 (1996)
153. "Predictions of Secondary Structure using Statistical Analyses of Electronic and Vibrational Circular Dichroism and Fourier Transform Infrared Spectra of Proteins in H2O" V. Baumruk, P. Pancoska, T. A. Keiderling Journal of Molecular Biology 259, 774-91 (1996)
154. "Protein structural segments and their interconnections derived from optical spectra. Thermal unfolding of ribonuclease T1 as an example." P. Pancoska, H. Fabian, G. Yoder, V. Baumruk, T. A. Keiderling Biochemistry 35, 13094-13106 (1996)
157. "Native-Like Secondary Structure in a Peptide from the Alpha-Domain of Hen Lysozyme." Jenny J. Yang, Bert van den Berg, Maureen Pitkeathly, Lorna J. Smith, Kimberley A. Bolin, Timothy A. Keiderling, Christina Redfield, Christopher M. Dobson, and Sheena E Radford Folding-&-Design, 1, 473-84, (1996)
C158. "Using peptides to dissect the protein folding pathway of lysozyme" J. J. Yang, M. Pitkeathly, L. J. Smith, T. A. Keiderling, K. A. Bolin, C. Redfield, C. M. Dobson, and S. E Radford Peptides: Chemistry, Structure, Biology, Proceedi ng of 14th American Peptide. Symposium, 825-826 (1996)
159. "Conformational study of some milk proteins. Comparison of the results of electronic circular dichroism and vibrational circular dichroism" Marie Urbanova, Timothy A. Keiderling, Petr Pancoska, Bioelectrochemistry and. Bioenergetics 41, 77- 80 (1996)
C162. "Vibrational Circular Dichroism Applications in Proteins and Peptides" T. A. Keiderling, Proceedings of the NATO ASI in Biomolecular Structure and Dynamics, Loutrakii Greece, May 1996, Ed. G. Vergoten (delayed second volume to 1998)
1997
C166. "Novel Approaches to Protein Structural Analyses using Combinations of Optical Spectroscopic Methods (Electronic and vibrational circular dichroism and FTIR studies)" P. Pancoska, V. Janota, T. A. Keiderling, Spectroscopy of Biological Molecules: Modern Trends, Ed. P. Carmona, R. Navarro, A. Hernanz, Kluwer Acad. Pub., Netherlands (1997) pp. 13-14
C168. "Measurement of Amide III Vibrational Circular Dichroism of Proteins. Correlation of Spectra to Secondary Structure by Similarity Algorithm" Bernoli I. Baello, Petr Pancoska and Timothy A. Keiderling, Spectroscopy of Biological Molecules: Modern Trends, Ed. P. Carmona, R. Navarro, A. Hernanz, Kluwer Acad. Pub., Netherlands (1997) pp. 25-26
169. "Vibrational circular dichroism spectra of proteins in the amide III region. Measurement and correlation of bandshape to secondary structure" B. I. Baello, P. Pancoska, T. A. Keiderling, Analytical Biochemistry 250, 212- 221 (1997)
1998
170. "Predictions of protein secondary structures using Factor Analysis on Fourier transform infrared spectra - Effect of Fourier self-deconvolution of the amide I and amide II bands." Wi S. Pancoska P. Keiderling TA. Biospectroscopy. 4(1998)93-106.
171. "Ionic strength effect on the thermal unfolding of alpha-spectrin peptides." D. Lusitani, N. Menhart, T.A. Keiderling and L. W. M. Fung. Biochemistry 37(1998)16546-16554.
1999
177. "Novel matrix descriptor for secondary structure segments in proteins: Demonstration of predictability from circular dichroism spectra," P. Pancoska, V. Janota, T. A. Keiderling, Analytical Biochemistry 267, 72-83 (1999)
179. "Novel use of a static modification of two-dimensional correlation analysis. I. Comparison of the secondary structure sensitivity of electronic circular dichroism, FT-IR, and Raman spectra or proteins" P. Pancoska, J. Kubelka, T. A. Keiderling, Applied Spectroscopy. 53, 655-665 (1999)
180. "Novel use of a static modification of two-dimensional correlation analysis. II. Heterospectral correlations of protein Raman, FT-IR, and circular dichroism spectra" , J. Kubelka, P. Pancoska, T. A. Keiderling, Applied Spectroscopy, 53, 666-671 (1999)
C 183. "Intermediates in the thermal unfolding of ribonuclease A," by Simona Stelea, Petr Pancoska and Timothy A. Keiderling, , in Spectroscopy of Biological Molecules: New Directions, Ed. J. Greve, G. J. Puppels, C. Otto, Kluwer Acad. Publ., Dordrecht, 1999, p. 65-66.
C 184. Protein spectra-structure relationship by novel modification of 2D correlation analysis. VCD applications. Jan Kubelka, Petr Pancoska and Timothy A. Keiderling, , in Spectroscopy of Biological Molecules: New Directions, Ed. J. Greve, G. J. Puppels, C. Otto, Kluwer Acad. Publ., Dordrecht, 1999, p. 67-68.
C 185. " Protein hydrogen-deuterium exchange FT-IR spectroscopy and secondary structure correlation," Bernoli I. Baello, Petr Pancoska and Timothy A. Keiderling, in Spectroscopy of Biological Molecules: New Directions, Ed. J. Greve, G. J. Puppels, C. Otto, Kluwer Acad. Publ., Dordrecht, 1999, p. 61-62.
2000
187. "Enhanced prediction accuracy of protein secondary structure using hydrogen exchange FourierTransform Infrared spectroscopy" B. I. Baello, P. Pancoska, T. A. Keiderling, Analytical Biochemistry 280, 46-57 (2000)
194. "Folding studies on the human chorionic gonadotropin b -subunit using optical spectroscopy of peptide fragments" R. A. G. D. Silva, S. A. Sherman, F. Perini, E. Bedows, T. A. Keiderling, Journal of the American Chemical Society, 122, 8623-8630 (2000)
R 186. "Peptide and Protein Conformational Studies with Vibrational Circular Dichroism and RelatedSpectroscopies", Timothy A. Keiderling, (Revised and Expanded Chapter) In Circular Dichroism: Principles and Applications, 2nd Edition. (Eds. K. Nakanishi, N. Berova and R. A. Woody, JohnWiley & Sons, New York (2000) p. 621-666
2001
197. "Thermal unfolding of Ribonuclese A in phosphate at neutral pH: Deviations from the two-statemodel" Simona Stelea, Petr Pancoska, A. Steven Benight, T. A. Keiderling, Protein Science 10,970-978 (2001)
R 189. "Vibrational Circular Dichroism of Peptides and Proteins: Survey of Techniques, Qualitative and Quantitative Analyses, and Applications" Timothy A. Keiderling, Chapter in Infrared and Raman Spectroscopy of Biological Materials, Ed. Bing Yan and H.-U. Gremlich, Marcel Dekker, New York (2001) p.55-100.
206. "Pretransitional Structural Changes in the Thermal Denaturation of Ribonuclease S and S protein" Simona D. Stelea, T. A. Keiderling, Biophysical Journal 83, 2259-2269 (2002)
R 207. "Spectroscopic characterization of Unfolded peptides and proteins studied with infrared absorption and vibrational circular dichroism spectra" T. A. Keiderling and Qi Xu, Advances in Protein Chemistry Volume 62, [Unfolded Proteins, Dedicated to John Edsall, Ed.: George Rose, Academic Press:New York] (2002) pp. 111-161.
R 208. " Protein and Peptide Secondary Structure and Conformational Determination with Vibrational Circular Dichroism " Timothy A. Keiderling, Current Opinions in Chemical Biology (Ed. Julie Leary and Mark Arnold) 6, 682-688 (2002)
2004
216. “Optical Spectroscopic Differentiation of Various Equilibrium Denatured States of Horse Cytochrome-c”, Qi Xu and Timothy A. Keiderling Biospectroscopy(Biopolymers) 73, 716-726 (2004)
220. "Effect of sodium dodecyl sulfate on folding and unfolding of acid denatured cytochrome c. A spectroscopic approach" Qi Xu, T. A. Keiderling, Protein Science 13, 2949-2959, (2004).
2005
222. "Optical Spectra of Unfolded Proteins, a Partially Ordered Polymer Problem," by Qi Xu and Timothy A Keiderling, Macromolecular Symposia, 220, 17-31 (2005)
226. “Characterization of serine/cysteine protease
inhibitor a1-antitripsin from
meconium-instilled rabbit lungs”
A.M. Zagariya, R. Bhat, E. Zhabotynsky, S. Navale, Q. Xu,T. A.
Keiderling Journal of Cellular Biochemistry
96, 137-144 (2005)
227. "Trifluoroethanol-induced Unfolding of Concanavalin A: Equilibrium and Time-resolved Optical Spectroscopic Studies", Qi Xu, Timothy A. Keiderling, Biochemistry 44, 7976-7987 (2005)
2006
231. “Stop-flow kinetics studies of the interaction of surfactant, sodium dodecyl sulfate, with acid denatured cytochrome c.,” Qi Xu, T. A. Keiderling, Proteins: Structure, Function and Bioinformatics 63, 571-580 (2006)
232.“Lipid induced conformational switch of b-lactoglobulin: Equilibrium and kinetic studies. “ Xiuqi Zhang, T. A. Keiderling Biochemistry (2006, in press)
R 198. "Vibrational circular dichroism of biopolymers. Summary of methods and applications" Timothy A. Keiderling, Jan Kubelka, Jovencio Hilario, in Vibrational spectroscopy of polymers and biological systems, Ed. Mark Braiman, Vasilis Gregoriou, Marcel Dekker, New York (accepted for publication, 2001, maybe out in 2003)